Package: MALDIrppa 1.1.0-2

MALDIrppa: MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis

Provides methods for quality control and robust pre-processing and analysis of MALDI mass spectrometry data (Palarea-Albaladejo et al. (2018) <doi:10.1093/bioinformatics/btx628>).

Authors:Javier Palarea-Albaladejo [cre, aut], Paolo Ribeca [ctb]

MALDIrppa_1.1.0-2.tar.gz
MALDIrppa_1.1.0-2.zip(r-4.5)MALDIrppa_1.1.0-2.zip(r-4.4)MALDIrppa_1.1.0-2.zip(r-4.3)
MALDIrppa_1.1.0-2.tgz(r-4.5-any)MALDIrppa_1.1.0-2.tgz(r-4.4-any)MALDIrppa_1.1.0-2.tgz(r-4.3-any)
MALDIrppa_1.1.0-2.tar.gz(r-4.5-noble)MALDIrppa_1.1.0-2.tar.gz(r-4.4-noble)
MALDIrppa_1.1.0-2.tgz(r-4.4-emscripten)MALDIrppa_1.1.0-2.tgz(r-4.3-emscripten)
MALDIrppa.pdf |MALDIrppa.html
MALDIrppa/json (API)
NEWS

# Install 'MALDIrppa' in R:
install.packages('MALDIrppa', repos = c('https://japal.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/japal/maldirppa/issues

Datasets:
  • spectra - Example mass spectra profiles
  • type - Example mass spectra metadata

On CRAN:

Conda:

mass-spectrometrypre-processing

6.06 score 2 stars 1 packages 32 scripts 254 downloads 3 mentions 20 exports 8 dependencies

Last updated 1 years agofrom:dc6a7ae2ed. Checks:6 OK, 3 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 28 2025
R-4.5-winNOTEMar 28 2025
R-4.5-macNOTEMar 28 2025
R-4.5-linuxNOTEMar 28 2025
R-4.4-winOKMar 28 2025
R-4.4-macOKMar 28 2025
R-4.4-linuxOKMar 28 2025
R-4.3-winOKMar 28 2025
R-4.3-macOKMar 28 2025

Exports:addMetadataalignPeakscountPeaksdeletePeaksdetectOutliersimportSpectrapeakPatternsplot.scSpectrarawToPeaksrawToSpectraredResolutionscreenSpectrasnrPeakssummary.scSpectrasummaryPeakssummarySpectratransfIntensitywavSmoothingwriteIntensitywriteMetadata

Dependencies:DEoptimRlatticeMALDIquantMASSmultitaperrobustbasesignalwaveslim

Robust MALDI mass spectra data pre-processing pipeline with MALDIrppa (up to v1.0.5-1)

Rendered fromMALDIrppa_vignette_v105.Rmdusingknitr::rmarkdownon Mar 28 2025.

Last update: 2022-02-10
Started: 2022-02-10

Robust MALDI mass spectra data pre-processing pipeline with MALDIrppa v1.1.0

Rendered fromMALDIrppa_vignette_v110.Rmdusingknitr::rmarkdownon Mar 28 2025.

Last update: 2022-02-10
Started: 2022-02-10